man e-PCR (Commandes) - Find sequence tagged sites (STS) in DNA sequences

NAME

e-PCR - Find sequence tagged sites (STS) in DNA sequences

SYNOPSIS

e-PCR stsfile seqfile [options]

DESCRIPTION

The program substitutes blast in the location of pairs primers on the genome that may yield a PCR product.

OPTIONS

M=##
Margin (default 50)
N=##
Number of mismatches allowed (default 0)
-mid
Show midpoint of STS location instead of range

SEE ALSO

bioperl (1)

/usr/share/doc/ncbi-epcr

/usr/share/ncbi/e-PCR/db/<sequence tag data> in ncbi-epcr-data

/usr/share/ncbi/e-PCR/samples/<sequences from genbank> in ncbi-epcr-data

AUTHOR

This manual page was written by Steffen Moeller moeller@pzr.uni-rostock.de for the Debian system (but may be used by others). Permission is granted to copy, distribute and/or modify this document under the terms of the GNU General Public License, Version 2 any later version published by the Free Software Foundation.

On Debian systems, the complete text of the GNU General Public License can be found in /usr/share/common-licenses/GPL.