man gbseqget (Commandes) - format sequences from GenBank as an XML GBSet
NAME
gbseqget - format sequences from GenBank as an XML GBSet
SYNOPSIS
gbseqget [-] [-d filename] [-i filename] [-m n/p/b] [-n] [-o filename] [-v]
DESCRIPTION
gbseqget retrieves biological sequence data from GenBank (according to an input list of GI accession numbers) and prints it out as an XML GBSet document.
OPTIONS
A summary of options is included below.
- -
- Print usage message
- -d filename
- Input file name for date list (desired accessions, one per line, followed by a blank line and a list of allowed dates, also one per line)
- -i filename
- Input file name for GI list (default = stdin)
- -m n/p/b
- Molecule type:
- n
- Nucleotide (default)
- p
- Protein
- b
- Both
- -n
- Return only new records (for which the given GI refers to an old version)
- -o filename
- Output file name for the XML GBSet (default = stdout)
- -v
- Fetch SNP Variations
AUTHOR
The National Center for Biotechnology Information.